Information for 11-GVAGTGCGTTTCG (Motif 13)

A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G
Reverse Opposite:
A G T C A T C G C G T A C G T A C T G A A G T C A T C G A G T C G T C A A G T C A C G T A G T C A G T C
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.850
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 23.4bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GVAGTGCGTTTCG
NNNANTGCAGTGCNNTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GVAGTGCGTTTCG------
----NTGGTTTCGGTTNNN
 A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GVAGTGCGTTTCG-----
-NNNTTGGTTTCGNTNNN
 A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GVAGTGCGTTTCG-
--RGTGGGYGTGGC
 A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GVAGTGCGTTTCG-----
---TNTGGTTTCGATACN
 A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GVAGTGCGTTTCG------
----TNAGTTTCGATTTTN
 A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GVAGTGCGTTTCG
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GVAGTGCGTTTCG
TTGAGTGSTT----
 A C G T A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GVAGTGCGTTTCG-
--AGTGGGCGTGGC
 A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G A C G T
A C G T A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GVAGTGCGTTTCG--
NNNTNGGGCGTATNNTN
 A C G T A C G T A C T G T A C G C G T A A C T G A C G T A C T G A T G C A C T G A G C T A C G T A C G T A T G C A C T G A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T