Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-181 | -4.181e+02 | 0.0000 | 213.0 | 25.09% | 742.0 | 1.59% | motif file (matrix) |
svg |
2 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-37 | -8.733e+01 | 0.0000 | 228.0 | 26.86% | 5056.5 | 10.82% | motif file (matrix) |
svg |
3 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-33 | -7.691e+01 | 0.0000 | 107.0 | 12.60% | 1441.7 | 3.08% | motif file (matrix) |
svg |
4 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-30 | -6.989e+01 | 0.0000 | 128.0 | 15.08% | 2177.8 | 4.66% | motif file (matrix) |
svg |
5 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-27 | -6.349e+01 | 0.0000 | 373.0 | 43.93% | 12339.8 | 26.39% | motif file (matrix) |
svg |
6 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-27 | -6.307e+01 | 0.0000 | 110.0 | 12.96% | 1795.1 | 3.84% | motif file (matrix) |
svg |
7 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-26 | -6.125e+01 | 0.0000 | 173.0 | 20.38% | 3937.8 | 8.42% | motif file (matrix) |
svg |
8 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-24 | -5.590e+01 | 0.0000 | 163.0 | 19.20% | 3764.7 | 8.05% | motif file (matrix) |
svg |
9 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-22 | -5.236e+01 | 0.0000 | 152.0 | 17.90% | 3492.1 | 7.47% | motif file (matrix) |
svg |
10 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-18 | -4.283e+01 | 0.0000 | 55.0 | 6.48% | 687.9 | 1.47% | motif file (matrix) |
svg |
11 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-16 | -3.892e+01 | 0.0000 | 68.0 | 8.01% | 1110.7 | 2.38% | motif file (matrix) |
svg |
12 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-16 | -3.890e+01 | 0.0000 | 46.0 | 5.42% | 531.2 | 1.14% | motif file (matrix) |
svg |
13 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-16 | -3.851e+01 | 0.0000 | 65.0 | 7.66% | 1033.7 | 2.21% | motif file (matrix) |
svg |
14 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-16 | -3.794e+01 | 0.0000 | 85.0 | 10.01% | 1657.8 | 3.55% | motif file (matrix) |
svg |
15 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-16 | -3.705e+01 | 0.0000 | 72.0 | 8.48% | 1273.9 | 2.72% | motif file (matrix) |
svg |
16 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-15 | -3.642e+01 | 0.0000 | 89.0 | 10.48% | 1834.4 | 3.92% | motif file (matrix) |
svg |
17 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-15 | -3.609e+01 | 0.0000 | 71.0 | 8.36% | 1267.1 | 2.71% | motif file (matrix) |
svg |
18 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-15 | -3.572e+01 | 0.0000 | 59.0 | 6.95% | 923.5 | 1.98% | motif file (matrix) |
svg |
19 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-14 | -3.410e+01 | 0.0000 | 77.0 | 9.07% | 1510.3 | 3.23% | motif file (matrix) |
svg |
20 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-13 | -3.098e+01 | 0.0000 | 34.0 | 4.00% | 367.1 | 0.79% | motif file (matrix) |
svg |
21 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-13 | -3.035e+01 | 0.0000 | 37.0 | 4.36% | 445.6 | 0.95% | motif file (matrix) |
svg |
22 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-13 | -3.016e+01 | 0.0000 | 38.0 | 4.48% | 472.8 | 1.01% | motif file (matrix) |
svg |
23 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-12 | -2.888e+01 | 0.0000 | 196.0 | 23.09% | 6467.2 | 13.83% | motif file (matrix) |
svg |
24 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-11 | -2.732e+01 | 0.0000 | 83.0 | 9.78% | 1942.5 | 4.15% | motif file (matrix) |
svg |
25 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-10 | -2.429e+01 | 0.0000 | 80.0 | 9.42% | 1954.4 | 4.18% | motif file (matrix) |
svg |
26 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-10 | -2.377e+01 | 0.0000 | 71.0 | 8.36% | 1650.9 | 3.53% | motif file (matrix) |
svg |
27 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-10 | -2.362e+01 | 0.0000 | 66.0 | 7.77% | 1480.0 | 3.17% | motif file (matrix) |
svg |
28 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.261e+01 | 0.0000 | 52.0 | 6.12% | 1042.3 | 2.23% | motif file (matrix) |
svg |
29 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-8 | -2.055e+01 | 0.0000 | 30.0 | 3.53% | 435.5 | 0.93% | motif file (matrix) |
svg |
30 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-8 | -2.033e+01 | 0.0000 | 155.0 | 18.26% | 5272.4 | 11.28% | motif file (matrix) |
svg |
31 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-8 | -1.990e+01 | 0.0000 | 25.0 | 2.94% | 318.5 | 0.68% | motif file (matrix) |
svg |
32 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-8 | -1.876e+01 | 0.0000 | 21.0 | 2.47% | 240.6 | 0.51% | motif file (matrix) |
svg |
33 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-7 | -1.778e+01 | 0.0000 | 14.0 | 1.65% | 107.4 | 0.23% | motif file (matrix) |
svg |
34 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.672e+01 | 0.0000 | 49.0 | 5.77% | 1141.4 | 2.44% | motif file (matrix) |
svg |
35 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-7 | -1.657e+01 | 0.0000 | 28.0 | 3.30% | 463.6 | 0.99% | motif file (matrix) |
svg |
36 |
| PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-6 | -1.584e+01 | 0.0000 | 39.0 | 4.59% | 828.4 | 1.77% | motif file (matrix) |
svg |
37 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-6 | -1.561e+01 | 0.0000 | 57.0 | 6.71% | 1480.2 | 3.17% | motif file (matrix) |
svg |
38 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.534e+01 | 0.0000 | 53.0 | 6.24% | 1343.7 | 2.87% | motif file (matrix) |
svg |
39 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.366e+01 | 0.0000 | 12.0 | 1.41% | 109.0 | 0.23% | motif file (matrix) |
svg |
40 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-5 | -1.305e+01 | 0.0000 | 58.0 | 6.83% | 1648.8 | 3.53% | motif file (matrix) |
svg |
41 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.206e+01 | 0.0001 | 69.0 | 8.13% | 2155.6 | 4.61% | motif file (matrix) |
svg |
42 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-5 | -1.162e+01 | 0.0001 | 30.0 | 3.53% | 668.4 | 1.43% | motif file (matrix) |
svg |
43 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-4 | -1.077e+01 | 0.0002 | 9.0 | 1.06% | 80.0 | 0.17% | motif file (matrix) |
svg |
44 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-4 | -1.012e+01 | 0.0003 | 24.0 | 2.83% | 516.9 | 1.11% | motif file (matrix) |
svg |
45 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-4 | -1.002e+01 | 0.0004 | 61.0 | 7.18% | 1960.0 | 4.19% | motif file (matrix) |
svg |
46 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-4 | -9.921e+00 | 0.0004 | 56.0 | 6.60% | 1756.6 | 3.76% | motif file (matrix) |
svg |
47 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-4 | -9.280e+00 | 0.0007 | 254.0 | 29.92% | 11333.7 | 24.24% | motif file (matrix) |
svg |
48 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-3 | -9.040e+00 | 0.0009 | 20.0 | 2.36% | 418.0 | 0.89% | motif file (matrix) |
svg |
49 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-3 | -8.660e+00 | 0.0013 | 26.0 | 3.06% | 641.7 | 1.37% | motif file (matrix) |
svg |
50 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -8.610e+00 | 0.0013 | 41.0 | 4.83% | 1223.1 | 2.62% | motif file (matrix) |
svg |
51 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.402e+00 | 0.0016 | 26.0 | 3.06% | 652.5 | 1.40% | motif file (matrix) |
svg |
52 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.157e+00 | 0.0020 | 33.0 | 3.89% | 930.2 | 1.99% | motif file (matrix) |
svg |
53 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.520e+00 | 0.0037 | 23.0 | 2.71% | 580.3 | 1.24% | motif file (matrix) |
svg |
54 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -7.361e+00 | 0.0043 | 88.0 | 10.37% | 3405.3 | 7.28% | motif file (matrix) |
svg |
55 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-3 | -7.354e+00 | 0.0043 | 40.0 | 4.71% | 1262.9 | 2.70% | motif file (matrix) |
svg |
56 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-3 | -7.242e+00 | 0.0047 | 200.0 | 23.56% | 8926.3 | 19.09% | motif file (matrix) |
svg |
57 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.237e+00 | 0.0047 | 133.0 | 15.67% | 5578.9 | 11.93% | motif file (matrix) |
svg |
58 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-3 | -7.190e+00 | 0.0047 | 27.0 | 3.18% | 747.7 | 1.60% | motif file (matrix) |
svg |
59 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-3 | -7.094e+00 | 0.0051 | 27.0 | 3.18% | 752.7 | 1.61% | motif file (matrix) |
svg |
60 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -6.968e+00 | 0.0057 | 37.0 | 4.36% | 1163.4 | 2.49% | motif file (matrix) |
svg |
61 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.785e+00 | 0.0067 | 8.0 | 0.94% | 111.8 | 0.24% | motif file (matrix) |
svg |
62 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -6.733e+00 | 0.0070 | 38.0 | 4.48% | 1221.2 | 2.61% | motif file (matrix) |
svg |
63 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-2 | -6.721e+00 | 0.0070 | 51.0 | 6.01% | 1784.0 | 3.82% | motif file (matrix) |
svg |
64 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.717e+00 | 0.0070 | 81.0 | 9.54% | 3151.1 | 6.74% | motif file (matrix) |
svg |
65 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.677e+00 | 0.0071 | 215.0 | 25.32% | 9798.7 | 20.96% | motif file (matrix) |
svg |
66 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -6.671e+00 | 0.0071 | 33.0 | 3.89% | 1017.8 | 2.18% | motif file (matrix) |
svg |
67 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.617e+00 | 0.0073 | 69.0 | 8.13% | 2605.3 | 5.57% | motif file (matrix) |
svg |
68 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -6.473e+00 | 0.0083 | 36.0 | 4.24% | 1155.8 | 2.47% | motif file (matrix) |
svg |
69 |
| Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer | 1e-2 | -6.407e+00 | 0.0087 | 29.0 | 3.42% | 870.7 | 1.86% | motif file (matrix) |
svg |
70 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -6.366e+00 | 0.0089 | 26.0 | 3.06% | 752.7 | 1.61% | motif file (matrix) |
svg |
71 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -6.295e+00 | 0.0095 | 57.0 | 6.71% | 2091.0 | 4.47% | motif file (matrix) |
svg |
72 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.252e+00 | 0.0097 | 12.0 | 1.41% | 242.9 | 0.52% | motif file (matrix) |
svg |
73 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.673e+00 | 0.0171 | 34.0 | 4.00% | 1128.8 | 2.41% | motif file (matrix) |
svg |
74 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.519e+00 | 0.0197 | 97.0 | 11.43% | 4071.2 | 8.71% | motif file (matrix) |
svg |
75 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.492e+00 | 0.0200 | 44.0 | 5.18% | 1581.5 | 3.38% | motif file (matrix) |
svg |
76 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-2 | -5.444e+00 | 0.0207 | 15.0 | 1.77% | 375.8 | 0.80% | motif file (matrix) |
svg |
77 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.420e+00 | 0.0209 | 58.0 | 6.83% | 2226.8 | 4.76% | motif file (matrix) |
svg |
78 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -5.310e+00 | 0.0231 | 14.0 | 1.65% | 344.8 | 0.74% | motif file (matrix) |
svg |
79 |
| EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer | 1e-2 | -5.212e+00 | 0.0251 | 4.0 | 0.47% | 38.5 | 0.08% | motif file (matrix) |
svg |
80 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -5.160e+00 | 0.0261 | 43.0 | 5.06% | 1567.5 | 3.35% | motif file (matrix) |
svg |
81 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -5.129e+00 | 0.0266 | 42.0 | 4.95% | 1525.1 | 3.26% | motif file (matrix) |
svg |
82 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.127e+00 | 0.0266 | 197.0 | 23.20% | 9188.2 | 19.65% | motif file (matrix) |
svg |
83 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -5.120e+00 | 0.0266 | 21.0 | 2.47% | 623.6 | 1.33% | motif file (matrix) |
svg |
84 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-2 | -4.819e+00 | 0.0350 | 29.0 | 3.42% | 978.0 | 2.09% | motif file (matrix) |
svg |
85 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.695e+00 | 0.0392 | 100.0 | 11.78% | 4347.2 | 9.30% | motif file (matrix) |
svg |
86 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -4.646e+00 | 0.0406 | 33.0 | 3.89% | 1167.4 | 2.50% | motif file (matrix) |
svg |
87 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -4.639e+00 | 0.0406 | 34.0 | 4.00% | 1212.3 | 2.59% | motif file (matrix) |
svg |