Information for 2-GGAACAGTATGACCGG (Motif 5)

A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
Reverse Opposite:
G T A C A G T C A T C G C T A G A C G T A G T C C G T A A G C T C G T A A T G C A C G T C T A G A C G T A C G T A G T C A G T C
p-value:1e-17
log p-value:-3.950e+01
Information Content per bp:1.910
Number of Target Sequences with motif211.0
Percentage of Target Sequences with motif24.85%
Number of Background Sequences with motif6445.4
Percentage of Background Sequences with motif13.79%
Average Position of motif in Targets48.7 +/- 25.3bp
Average Position of motif in Background50.0 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAACAGTATGACCGG
TGGAACAGMA-------
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGAACAGTATGACCGG
VAGRACAKWCTGTYC--
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGAACAGTATGACCGG
AAGAACATWHTGTTC--
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGAACAGTATGACCGG
CCAGGAACAG---------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAGTATGACCGG
NAGAACAGNCTGTNCT-
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAACAGTATGACCGG
AGNACANNNTGTNCTN
 A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAACAGTATGACCGG
VAGRACAKNCTGTBC--
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAACAGTATGACCGG
TGAACCCGATGACCC-
 A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAACAGTATGACCGG
GGGAACACAATGTTCCC
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAACAGTATGACCGG
AGGNCANNGTGACCT-
 A C T G A C T G C G T A C G T A A G T C C G T A A T C G A C G T C T G A A C G T A C T G C G T A A G T C T A G C A C T G A C T G
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T