Information for 11-TTTACTGGCT (Motif 22)

A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C G T A A C T G A C G T C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.546e+01
Information Content per bp:1.940
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets32.2 +/- 17.7bp
Average Position of motif in Background57.4 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TTTACTGGCT-
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTGGCT
NTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTGGCT
TTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTACTGGCT--
NGANTTTTATGGCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTACTGGCT
DGWTTTATGRCN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTACTGGCT---
-TGATTGGCTANN
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T A C G T A C G T A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTGGCT
NTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTTACTGGCT-
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTACTGGCT
TTTAATTGCN-
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTACTGGCT
TTTTATTRGN-
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C T A G G T A C A C G T
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T