Information for 18-AATATTTACHCAG (Motif 20)

C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G
Reverse Opposite:
T A G C A G C T C A T G C A T G C T A G G A C T G C T A G T C A C G T A A G C T C G T A G A C T G C A T
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.616
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.89%
Number of Background Sequences with motif532.1
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets48.7 +/- 27.9bp
Average Position of motif in Background50.2 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AATATTTACHCAG----
NSTGTTTRCWCAGBNNN
 C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AATATTTACHCAG
-ATATTTACATA-
 C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AATATTTACHCAG-
--TGTTTACTTAGG
 C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AATATTTACHCAG
-ATATTTACATA-
 C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AATATTTACHCAG-
BSNTGTTTACWYWGN
 A C G T C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AATATTTACHCAG
--TRTTTACTTW-
 C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AATATTTACHCAG
TCCATGTTTACTTTG
 A C G T A C G T C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AATATTTACHCAG
TTTGTTTACTTA-
 C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AATATTTACHCAG
--TGTTTACTTT-
 C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AATATTTACHCAG
--TGTTTACTTT-
 C G T A C T G A G A C T T C G A A C G T C A G T C G A T C T G A A G T C G T A C G T A C C T G A A T C G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T