Information for 9-CACATAATTG (Motif 17)

T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G
Reverse Opposite:
G T A C C G T A C G T A G A C T C G A T C G T A C G A T A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.293e+01
Information Content per bp:1.845
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif58.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets53.4 +/- 23.6bp
Average Position of motif in Background52.4 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX2/MA0708.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CACATAATTG-
---NTAATTGG
 T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

Msx3/MA0709.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CACATAATTG-
---NTAATTGN
 T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G

Dlx2/MA0885.1/Jaspar

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CACATAATTG-
---NTAATTGN
 T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C

Dlx3/MA0880.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CACATAATTG-
---NTAATTGN
 T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

Dlx4/MA0881.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CACATAATTG-
---NTAATTGN
 T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

MSX1/MA0666.1/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CACATAATTG-
---NTAATTGG
 T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G

DLX6/MA0882.1/Jaspar

Match Rank:7
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CACATAATTG-
---NTAATTGN
 T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

Nobox/MA0125.1/Jaspar

Match Rank:8
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CACATAATTG--
----TAATTGGT
 T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T

Nkx2-5/MA0063.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CACATAATTG
---TTAATTG
 T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G
A C G T A C G T A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G

GBX2/MA0890.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CACATAATTG--
--NNTAATTGNN
 T G A C C G T A G T A C C G T A A C G T C G T A C T G A C G A T C G A T A C T G A C G T A C G T
A C G T A C G T T A C G A G T C C G A T T G C A T G C A A C G T A G C T C T A G T A C G A G C T