Information for 15-CAATGAATGATAG (Motif 16)

T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G
Reverse Opposite:
A T G C G A C T G T C A C G A T A G T C C G T A G C A T A C G T A G T C C G T A G C A T C A G T A T C G
p-value:1e-10
log p-value:-2.393e+01
Information Content per bp:1.700
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif79.7
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets60.6 +/- 24.6bp
Average Position of motif in Background44.0 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CAATGAATGATAG
-TTTGATTGATGN
 T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CAATGAATGATAG
ACTATGAATGAATGAT--
 A C G T A C G T A C G T A C G T A C G T T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CAATGAATGATAG--
---TGAGTGACAGSC
 T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAATGAATGATAG-
--NTGATTGACAGN
 T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAATGAATGATAG-
--ATGATKGATGRC
 T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAATGAATGATAG
---TGATTGATGA
 T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAATGAATGATAG-
--BTGABTGACAGS
 T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Hoxa9/MA0594.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAATGAATGATAG-
---TGATTTATGGC
 T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G A C G T
A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAATGAATGATAG--
NNANTGATTGATNTTN
 A C G T T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAATGAATGATAG--
---TGATTRATGGCY
 T A G C G T C A C G T A C G A T C T A G T C G A C G T A C G A T C T A G C G T A C A G T C T G A A T C G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C