Information for 5-YTGTGGTTTG (Motif 4)

A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G
Reverse Opposite:
T A G C G C T A T C G A T C G A A G T C A G T C C G T A A T G C G T C A T C G A
p-value:1e-17
log p-value:-4.131e+01
Information Content per bp:1.737
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.72%
Number of Background Sequences with motif821.2
Percentage of Background Sequences with motif1.71%
Average Position of motif in Targets49.4 +/- 27.2bp
Average Position of motif in Background50.1 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:YTGTGGTTTG
CTGTGGTTTN
 A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--YTGTGGTTTG
NNHTGTGGTTWN
 A C G T A C G T A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--YTGTGGTTTG
GTCTGTGGTTT-
 A C G T A C G T A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-YTGTGGTTTG
NNTGTGGTTT-
 A C G T A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-YTGTGGTTTG
GCTGTGGTTT-
 A C G T A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-YTGTGGTTTG
TTTGCGGTTT-
 A C G T A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:YTGTGGTTTG
TTGCGGTTT-
 A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:YTGTGGTTTG
--GTGGAT--
 A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:YTGTGGTTTG--
-TGTGGATTNNN
 A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-YTGTGGTTTG-
NNTGTGGATTSS
 A C G T A G C T A C G T A T C G A C G T A C T G C T A G A G C T A G C T C G A T A T C G A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G