p-value: | 1e-10 |
log p-value: | -2.475e+01 |
Information Content per bp: | 1.837 |
Number of Target Sequences with motif | 21.0 |
Percentage of Target Sequences with motif | 2.35% |
Number of Background Sequences with motif | 167.3 |
Percentage of Background Sequences with motif | 0.35% |
Average Position of motif in Targets | 49.7 +/- 23.8bp |
Average Position of motif in Background | 50.2 +/- 32.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0157.1_Rara_2/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTGACCCAA---- NNCNTGACCCCGCTCT |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 2 |
Score: | 0.72 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCCAA --TGACCT-- |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTGACCCAA---- NNNNTGACCCGGCGCG |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCCAA-- --TGACCTARTT |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 5 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGACCCAA----- -TTGACCTANTTATN |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTGACCCAA---- TGTCGTGACCCCTTAAT |
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FOS::JUN/MA0099.2/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCTGACCCAA --TGACTCA- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCCAA --TGACCTYA |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 9 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCCAA --TGACCYCT |
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Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTGACCCAA GCCACACCCA- |
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