Information for 21-GACTGGCTGAGCG (Motif 31)

A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A G T C
p-value:1e-5
log p-value:-1.311e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets21.8 +/- 13.5bp
Average Position of motif in Background29.9 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACTGGCTGAGCG
TGATTGGCTANN--
 A C G T A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GACTGGCTGAGCG
--CCTGCTGAGH-
 A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GACTGGCTGAGCG--
NAGANTGGCGGGGNGNA
 A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GACTGGCTGAGCG
GTCATGCHTGRCTGS---
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GACTGGCTGAGCG
--TWGTCTGV---
 A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GACTGGCTGAGCG
CCGATTGGCT-----
 A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GACTGGCTGAGCG-
TCNCCTGCTGNGNNN
 A C G T A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GACTGGCTGAGCG
----NGCTN----
 A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GACTGGCTGAGCG
AATTTGCTGAC--
 A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GACTGGCTGAGCG
GGTCTGGCAT----
 A C G T A C T G C G T A A G T C A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C T G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T