Information for 14-AAGCAGGATGCCTGGW (Motif 20)

G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
Reverse Opposite:
C G A T T G A C T A G C C G T A A T C G C T A G A G T C G T C A A G C T A G T C G A T C A C G T A T C G A G T C A G C T C A G T
p-value:1e-10
log p-value:-2.352e+01
Information Content per bp:1.681
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif36.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets48.5 +/- 29.6bp
Average Position of motif in Background50.3 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AAGCAGGATGCCTGGW
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGCAGGATGCCTGGW
-ANCAGGATGT-----
 G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAGCAGGATGCCTGGW
CACAGCAGGGGG------
 A C G T A C G T G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGCAGGATGCCTGGW
TGGCAGNCTGCCAG--
 G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AAGCAGGATGCCTGGW
-------AGGCCTNG-
 G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGCAGGATGCCTGGW
-ANCAGGAAGT-----
 G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAGCAGGATGCCTGGW
TTGGCANNNTGCCAAG-
 A C G T G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:AAGCAGGATGCCTGGW
-------AGGCCTAG-
 G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AAGCAGGATGCCTGGW
-NDCAGGAARTNN---
 G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-9
Orientation:forward strand
Alignment:---------AAGCAGGATGCCTGGW
SMCAGTCWGAKGGAGGAGGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A C T G T A G C G T C A C T A G C T A G C T G A C A G T C T A G G A T C A T G C G C A T A C T G A C T G G C T A
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T A C G T A C G T A C G T A C G T