Information for 12-CTGAGCAAACACA (Motif 13)

A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A C G T A C G T C T A G A G T C A C G T A G T C C G T A A T C G
p-value:1e-11
log p-value:-2.742e+01
Information Content per bp:1.934
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 26.6bp
Average Position of motif in Background65.1 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----CTGAGCAAACACA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGAGCAAACACA
-WAAGTAAAYA--
 A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGCAAACACA
NCTAAGTAAACA--
 A C G T A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTGAGCAAACACA
-AAAGTAAACA--
 A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTGAGCAAACACA
-AAAGTAAACA--
 A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTGAGCAAACACA--
CAAAGTAAACANNNN
 A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTGAGCAAACACA-
CAAAAGTAAACAAAG
 A C G T A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGCAAACACA-
NCWRWGTAAACANSV
 A C G T A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGAGCAAACACA
--AAGTAAACAAA
 A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A
A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGAGCAAACACA----
-AAAGTAAACAAAAATT
 A T G C C G A T C T A G C G T A A C T G A G T C G T C A C G T A C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T