p-value: | 1e-13 |
log p-value: | -3.043e+01 |
Information Content per bp: | 1.813 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 1.00% |
Number of Background Sequences with motif | 5.0 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 46.3 +/- 23.1bp |
Average Position of motif in Background | 27.7 +/- 16.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.12 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CGGGTCAGTCCGGSTG CGCGCCGGGTCACGTA----- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGGGTCAGTCCGGSTG -AGGTCA--------- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CGGGTCAGTCCGGSTG AGRGGTCA--------- |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CGGGTCAGTCCGGSTG AGAGCGGGGTCAAGTA----- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CGGGTCAGTCCGGSTG TRAGGTCA--------- |
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RORA/MA0071.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGGGTCAGTCCGGSTG ATCAAGGTCA--------- |
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SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGGGTCAGTCCGGSTG CAGGTAAGTAT----- |
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PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGGGTCAGTCCGGSTG- ---GTCACGCTCNCTGA |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGGGTCAGTCCGGSTG CAGGTGAGG------- |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CGGGTCAGTCCGGSTG NTNNNGGGGTCANGNNN---- |
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