Information for 8-GGGTGTCACT (Motif 17)

T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T
Reverse Opposite:
C G T A A T C G G A C T A T C G G T C A G T A C T G C A T G A C G A T C A G T C
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.686
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif7.10%
Number of Background Sequences with motif1461.5
Percentage of Background Sequences with motif3.02%
Average Position of motif in Targets44.6 +/- 25.9bp
Average Position of motif in Background49.2 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GGGTGTCACT---
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PH0162.1_Six2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGGTGTCACT---
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A C G T T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGGTGTCACT---
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

Six3/MA0631.1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGGTGTCACT---
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGGTGTCACT---
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGGTGTCACT-
---AGTCACGC
 T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T A C G T
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGTGTCACT
AGGTGTCA--
 T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGTGTCACT
AGGTGTGA--
 T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGGTGTCACT---
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A C G T T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGTGTCACT--
GSCTGTCACTCA
 T C A G C T A G A C T G A C G T C A T G A C G T A T G C C T G A A T G C C G A T A C G T A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A