Information for 6-AAWAGCMKAM (Motif 14)

C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A
Reverse Opposite:
A C G T A C G T G T C A A C T G A C T G G T A C A C G T C G A T A C G T A C G T
p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.765
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.89%
Number of Background Sequences with motif267.7
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets51.6 +/- 23.7bp
Average Position of motif in Background49.7 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAWAGCMKAM
--CAGCC---
 C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAWAGCMKAM---
AAAAAGCGGAAGTA
 A C G T C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A A C G T A C G T A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AAWAGCMKAM
DCYAAAAATAGM----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AAWAGCMKAM
KCCAAAAATAGC----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AAWAGCMKAM
CCAAAAATAG-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AAWAGCMKAM
GCTAAAAATAGC----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------AAWAGCMKAM
ATGCTAAAAATAGAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AAWAGCMKAM-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AAWAGCMKAM-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AAWAGCMKAM-
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A A C T G A G T C G T A C A C G T T G C A G T C A A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T