Information for 8-CTGTGCTGCAGGA (Motif 10)

A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T C T A G A G T C C G T A A C T G A G T C C G T A T A G C C G T A A C T G
p-value:1e-11
log p-value:-2.685e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.8 +/- 30.1bp
Average Position of motif in Background47.7 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGTGCTGCAGGA--
CCACACAGCAGGAGA
 A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGTGCTGCAGGA--
---GGCTCYAKCAYC
 A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGTGCTGCAGGA
GCTGTG--------
 A C G T A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGTGCTGCAGGA---
------ANCAGGATGT
 A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGTGCTGCAGGA--
CCACACAGCAGGAGA
 A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGTGCTGCAGGA----
--DCHCAGCAGGRGGCC
 A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGTGCTGCAGGA--
GAGCACAGCAGGACA
 A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGTGCTGCAGGA
-NATGTTGCAA--
 A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTGTGCTGCAGGA--
---CACAGCAGGGGG
 A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CTGTGCTGCAGGA---
CNNNGCTACTGTANNN
 A G T C A C G T A C T G A C G T A C T G A G T C C G A T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T