Information for 5-GCATTAAACC (Motif 9)

A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C T G A G T C
p-value:1e-2
log p-value:-6.689e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets14.0 +/- 0.0bp
Average Position of motif in Background75.2 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GCATTAAACC
--ATTAAA--
 A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCATTAAACC-----
NNNAATTAATCCCCNCN
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCATTAAACC-----
GNNNATTAATCCCTNCN
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCATTAAACC-
--CTTAATCCC
 A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCATTAAACC-
---TTAATCCC
 A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCATTAAACC
YCATTAMC--
 A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCATTAAACC-----
GANNATTAATCCCTNNN
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCATTAAACC--
----TAATCCCN
 A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCATTAAACC
NGGATTAA---
 A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCATTAAACC-
NGYCATAAAWCH
 A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A