Information for 3-TGHAADGRAACAG (Motif 5)

C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A C G T A C G T A G T C A G T C G A C T A C G T A C G T C A G T G T A C C G T A
p-value:1e-6
log p-value:-1.494e+01
Information Content per bp:1.637
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif43.48%
Number of Background Sequences with motif2209.0
Percentage of Background Sequences with motif5.98%
Average Position of motif in Targets54.5 +/- 26.0bp
Average Position of motif in Background48.9 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.69
Offset:8
Orientation:reverse strand
Alignment:TGHAADGRAACAG-
--------CACAGN
 C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.68
Offset:5
Orientation:forward strand
Alignment:TGHAADGRAACAG--
-----TGGAACAGMA
 C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TGHAADGRAACAG
---CCAGGAACAG
 C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGHAADGRAACAG--
TGACANARRCCAGRC
 C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TGHAADGRAACAG---
----AGGAAACAGCTG
 C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGHAADGRAACAG
---AAATAAACA-
 C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGHAADGRAACAG----
----ATGCAACAGGTGG
 C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TGHAADGRAACAG
-----GTAAACAG
 C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGHAADGRAACAG--
----TGTAAACAGGA
 C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGHAADGRAACAG
--AAAGTAAACA-
 C G A T C A T G G C T A C G T A C G T A C T G A A C T G T C A G T C G A G T C A A T G C C G T A A C T G
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T