Information for 3-GTRANMCMTGTGDATT (Motif 4)

A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T
Reverse Opposite:
G T C A G T C A A G C T G T A C T A G C C G T A A G T C C G T A C A G T A T C G C A G T G C T A C G A T A G C T G C T A T G A C
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.593
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif26.09%
Number of Background Sequences with motif147.6
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets32.0 +/- 22.1bp
Average Position of motif in Background48.1 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.73
Offset:8
Orientation:reverse strand
Alignment:GTRANMCMTGTGDATT---
--------TGTGGATTNNN
 A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.71
Offset:6
Orientation:forward strand
Alignment:GTRANMCMTGTGDATT--
------NNTGTGGATTSS
 A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTRANMCMTGTGDATT
ANTNNTACATGTANNTN
 A C G T A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTRANMCMTGTGDATT
NNTTTTACATGTANNNT
 A C G T A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

ONECUT1/MA0679.1/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GTRANMCMTGTGDATT----
------ANTATCGATTTTTN
 A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTRANMCMTGTGDATT
ANTATTACATGTANNNN
 A C G T A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTRANMCMTGTGDATT-
-AAAGACCTGTCAATAC
 A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T A C G T
A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GTRANMCMTGTGDATT----
------ATTATCGATTTTTT
 A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GTRANMCMTGTGDATT-
--------TGTTTATTT
 A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

PH0128.1_Otp/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GTRANMCMTGTGDATT-------
------CNNATTAATTAATTNNN
 A C T G C G A T T C G A G C T A C G A T G T C A A T G C G T C A C G A T C T A G A C G T A C T G C A T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G