Information for 9-GCCCCGCMGMSKSTGA (Motif 11)

A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A A T G C G T C A A T G C A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A T C G A G T C
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.865
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.3 +/- 23.4bp
Average Position of motif in Background48.7 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCMGMSKSTGA
GGCCCCGCCCCC-----
 A C G T A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCCCGCMGMSKSTGA
GCCCCGCCCCCTCCC-
 A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCCCGCMGMSKSTGA
GCCCCGCCCCC-----
 A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCMGMSKSTGA
GCTCCGCCCMCY----
 A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCMGMSKSTGA
NAGCCCCGCCCCCN----
 A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCMGMSKSTGA
TACGCCCCGCCACTCTG--
 A C G T A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCMGMSKSTGA
TAAGCCACGCCCCCTTT--
 A C G T A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCCCGCMGMSKSTGA
GCCCCGCCCC------
 A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCGCMGMSKSTGA
GGCCACRCCCMK-----
 A C G T A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCMGMSKSTGA
GACCCCCCGCTGCGC----
 A C G T A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C T G A G T C T G A C A C T G G T A C A T C G A C G T A T C G A C G T A C T G C G T A
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T A C G T