Information for 11-GAGGGCGCSCTCGAGG (Motif 9)

A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
Reverse Opposite:
A G T C A G T C A G C T T A G C C T A G C T G A C A T G A T C G A C T G A G T C A T C G A G T C A G T C A G T C A C G T A G T C
p-value:1e-16
log p-value:-3.814e+01
Information Content per bp:1.781
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.6 +/- 16.0bp
Average Position of motif in Background55.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GAGGGCGCSCTCGAGG
---GGCGCGCT-----
 A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCGCSCTCGAGG
ATAAGGGCGCGCGAT---
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCGCSCTCGAGG
TTGGGGGCGCCCCTAG--
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCGCSCTCGAGG
ATAAAGGCGCGCGAT---
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGGCGCSCTCGAGG
NNNAAGGGGGCGGGNNN----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCGCSCTCGAGG
TGGCGCGCGCGCCTGA--
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGGGCGCSCTCGAGG
NGCGTGGGCGGR-------
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGCGCSCTCGAGG
TCGGTGGTCGCN-------
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGCSCTCGAGG
NNAGGGGCGGGGTNNA--
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAGGGCGCSCTCGAGG
TGCGTGGGYG---------
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A T G C A C T G A G T C A T G C G A T C A G C T G A T C A T C G T C G A T C A G C T A G
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T