Information for 8-CACTCTTGCG (Motif 8)

A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G
Reverse Opposite:
A G T C A C T G A G T C C G T A C G T A C T A G C G T A A C T G A C G T A C T G
p-value:1e-16
log p-value:-3.821e+01
Information Content per bp:1.946
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.7 +/- 19.8bp
Average Position of motif in Background44.9 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACTCTTGCG
RSCACTYRAG--
 A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACTCTTGCG-------
--CTCTCGCGAGATCTG
 A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACTCTTGCG
AASCACTCAA---
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CACTCTTGCG
MRSCACTYAA---
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACTCTTGCG
AGCCACTCAAG--
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACTCTTGCG---
-ATTCTCGCGAGA
 A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G A C G T A C G T A C G T
A C G T T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CACTCTTGCG-----
TGCAGTCATGCGTGACG
 A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G A C G T A C G T A C G T A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

POL002.1_INR/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACTCTTGCG
TCAGTCTT---
 A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CACTCTTGCG-----
NGCANTCATGCGTGACG
 A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G A C G T A C G T A C G T A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CACTCTTGCG----
NGTGTTCAVTSAAGCGKAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C T A G A C G T A C G T A C G T A C G T
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A