Information for 19-AAAAAAAAAM (Motif 34)

C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C
Reverse Opposite:
C A T G A C G T A G C T A C G T A C G T C A G T A C G T A C G T C A G T C G A T
p-value:1e-4
log p-value:-1.147e+01
Information Content per bp:1.684
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif8.82%
Number of Background Sequences with motif2426.3
Percentage of Background Sequences with motif5.04%
Average Position of motif in Targets45.7 +/- 29.3bp
Average Position of motif in Background49.2 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAM---
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAM---
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A C G T C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.76
Offset:-6
Orientation:forward strand
Alignment:------AAAAAAAAAM
TACTGGAAAAAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAAAAAAAAM----
AACAAACAACAAGAG
 A C G T C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C A C G T A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAM
AGCCGAAAAAAAAAT
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAM
AAATAAGAAAAAAC
 A C G T A C G T A C G T A C G T C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAAAAAAAAM---
-AAACAAACATTC
 C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

POL007.1_BREd/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AAAAAAAAAM
--NANANAC-
 C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAM-
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAM---
AAAGTAAACAAAAATT
 A C G T A C G T A C G T C G T A G T C A G T C A G T C A G T C A G T C A G T C A T C G A T G C A G T A C A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T