Information for 22-GACCTBCCTAGTT (Motif 30)

A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T
Reverse Opposite:
C G T A C G T A A T G C A C G T C G T A C T A G C T A G T G A C C T G A A C T G A C T G A C G T A G T C
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.821
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 26.8bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACCTBCCTAGTT
TGACCT--------
 A C G T A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACCTBCCTAGTT
TGACCYCT------
 A C G T A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GACCTBCCTAGTT
TGACCTTGAT----
 A C G T A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACCTBCCTAGTT
TGACCTARTT----
 A C G T A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GACCTBCCTAGTT
TTGACCTANTTATN-
 A C G T A C G T A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GACCTBCCTAGTT
TGACCTYA------
 A C G T A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTBCCTAGTT
CNNTTGACCTTTG-----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTBCCTAGTT
NNNNTGACCCGGCGCG--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GACCTBCCTAGTT
GTGACCTT-------
 A C G T A C G T A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GACCTBCCTAGTT---
------ACTAGTTAAC
 A C T G C G T A A G T C A G T C A G C T A C G T G A T C A G T C A C G T C G T A A T C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C