Information for 20-AGCAGATGAAAAT (Motif 28)

C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T C G A T A G T C C G T A A C G T A G T C A C G T A C T G A G T C A G C T
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.2 +/- 18.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGCAGATGAAAAT---
---ATATGCAAATNNN
 C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGCAGATGAAAAT
---ATATGCAAAT
 C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCAGATGAAAAT
AACAGATGGT---
 C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGCAGATGAAAAT
---TTATGCAAAT
 C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T
A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCAGATGAAAAT
ANCAGCTG-----
 C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGCAGATGAAAAT---
----TATGCWAATBAV
 C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCAGATGAAAAT
AACAGATGGC---
 C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGCAGATGAAAAT
----TATGCAAAT
 C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGCAGATGAAAAT---
----WATGCAAATGAG
 C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGCAGATGAAAAT--
---TTATGCAAATTA
 C T G A A C T G G T A C C G T A A C T G C G T A A C G T A C T G C G T A C G T A C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A