p-value: | 1e-10 |
log p-value: | -2.504e+01 |
Information Content per bp: | 1.820 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.80% |
Number of Background Sequences with motif | 3.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 48.5 +/- 33.7bp |
Average Position of motif in Background | 47.3 +/- 17.8bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTMWCWAKRGGY-- GGGTTACTANAGGTCA |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGTMWCWAKRGGY NNNGTAACTANGNNA |
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Nr1h3::Rxra/MA0494.1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGTMWCWAKRGGY-- NNGAGGTTACTNNAGGTCA |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GGTMWCWAKRGGY---- NNTNGNNGTAACCAAGNNNNAGN |
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Rarg(var.2)/MA0860.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGTMWCWAKRGGY-- AAGGTCACGAAAGGTCA |
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SOX9/MA0077.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGTMWCWAKRGGY --GAACAATGG-- |
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THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGTMWCWAKRGGY-- GGTCANYTGAGGWCA |
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PB0160.1_Rfxdc2_2/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGTMWCWAKRGGY NTNNCGTATCCAAGTNN |
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PH0161.1_Six1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GGTMWCWAKRGGY GATGGGGTATCATTTTT- |
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PH0166.1_Six6_2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GGTMWCWAKRGGY AATAGGGTATCAATATT- |
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