Information for 4-CGATGAGGTTTCTTCA (Motif 2)

A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A A C T G C G T A C G T A C G T A A G T C A G T C A C G T A G T C C G T A A C G T A G T C C T A G
p-value:1e-37
log p-value:-8.642e+01
Information Content per bp:1.970
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.6 +/- 22.1bp
Average Position of motif in Background53.0 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGATGAGGTTTCTTCA
-NNTGTGGTTT-----
 A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGATGAGGTTTCTTCA
-GATGACGT-------
 A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGATGAGGTTTCTTCA
--CTGTGGTTTN----
 A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGATGAGGTTTCTTCA
--TTGCGGTTT-----
 A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGATGAGGTTTCTTCA
GKMTCADRTTWC----
 A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGATGAGGTTTCTTCA
-GCTGTGGTTT-----
 A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CGATGAGGTTTCTTCA
AAACATAATGAGGTTGC----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGATGAGGTTTCTTCA
GKVTCADRTTWC----
 A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGATGAGGTTTCTTCA
-GATGACGTGGCANT-
 A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
A C G T T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGATGAGGTTTCTTCA
-TTTGCGGTTT-----
 A G T C A C T G C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A
A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T