Information for 13-TAACACTATG (Motif 12)

A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G
Reverse Opposite:
A G T C G T C A A C G T C G T A A C T G A C G T A C T G A G C T A C G T G T C A
p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.833
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.9 +/- 20.0bp
Average Position of motif in Background53.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0065.1_Sox15_1/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TAACACTATG---
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TAACACTATG
NAACAAT---
 A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TAACACTATG--
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TAACACTATG--
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TAACACTATG
-AACAAT---
 A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------TAACACTATG------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TAACACTATG--
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TAACACTATG---
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TAACACTATG--
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TAACACTATG
GAACAATGG-
 A C G T C G T A C T G A A G T C C G T A G T A C A C G T C G T A A C G T C T A G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T