Information for 17-GAHTAGHTTHCDA (Motif 31)

A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A
Reverse Opposite:
A C G T G A C T A C T G C A G T C G T A C G T A C G T A A G T C A C G T C G T A C A T G A G C T G T A C
p-value:1e-6
log p-value:-1.441e+01
Information Content per bp:1.794
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.6 +/- 29.2bp
Average Position of motif in Background22.8 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUX4/MA0468.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAHTAGHTTHCDA
TGATTAAATTA---
 A C G T A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAHTAGHTTHCDA
NWTGATTRGRTTAWN-
 A C G T A C G T A C G T A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C A C G T

DUXA/MA0884.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAHTAGHTTHCDA
NTGATTAAATTAN--
 A C G T A C G T A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAHTAGHTTHCDA--
ANNNCTAGTTAACNGNN
 A C G T A C G T A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAHTAGHTTHCDA
-ACTAGTTAAC--
 A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAHTAGHTTHCDA
GGATTAGC------
 A C G T A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAHTAGHTTHCDA
---TTGTTTAC--
 A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A
A C G T A C G T A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAHTAGHTTHCDA
GKMTCADRTTWC--
 A C G T A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GAHTAGHTTHCDA
AGGGGGATTAGCTGCC--
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAHTAGHTTHCDA
RGGATTAR-------
 A C G T A C G T A C T G C T G A G A T C A C G T C G T A A C T G G A C T A C G T A C G T G C T A A G T C C G T A C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T