Information for 4-CAGTMCCAGGCCTRTW (Motif 3)

A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
Reverse Opposite:
C G A T C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A T C G A C G T G T C A A G T C A C G T A C T G
p-value:1e-26
log p-value:-6.105e+01
Information Content per bp:1.893
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.7 +/- 15.3bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:CAGTMCCAGGCCTRTW
-----CNAGGCCT---
 A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CAGTMCCAGGCCTRTW
-----CTAGGCCT---
 A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGTMCCAGGCCTRTW
GGGGCCGAGGCCTG--
 A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGTMCCAGGCCTRTW
ACATGCCCGGGCAT---
 A C G T A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGTMCCAGGCCTRTW
-NNGGCCACGCCTTTN
 A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

TP53/MA0106.3/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAGTMCCAGGCCTRTW
AACATGCCCGGGCATGTC
 A C G T A C G T A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
C T G A C T G A G A T C C G T A G C A T T C A G G A T C G A T C A G T C C T A G C T A G C T A G A T G C G C T A G C A T C T A G G A C T G A T C

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGTMCCAGGCCTRTW
AAGTTCAAGGTCAGC-
 A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CAGTMCCAGGCCTRTW
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T A C G T A C G T A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CAGTMCCAGGCCTRTW
CTGTTCCTGG------
 A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTMCCAGGCCTRTW
YCAGGCWCAGTACCAGGCTC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C T A G C A G T T G C A A T G C A G T C C G T A C T A G A C T G A G T C A G T C A C G T C T A G A C G T C G T A
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C A C G T A C G T A C G T