Information for 16-CGTGTTGAATYTT (Motif 29)

A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T
Reverse Opposite:
C G T A C T G A C T G A C G T A A C G T A C G T T A G C C G T A C G T A A T G C G C T A A G T C A C T G
p-value:1e-7
log p-value:-1.662e+01
Information Content per bp:1.781
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.6 +/- 19.0bp
Average Position of motif in Background51.2 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGTGTTGAATYTT--
NNNTATTGAATTGNNN
 A C G T A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CGTGTTGAATYTT
----TTTAAT---
 A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CGTGTTGAATYTT
----TTGACTTTT
 A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTGTTGAATYTT
TAAGCCACTTGAATTT-
 A C G T A C G T A C G T A C G T A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGTGTTGAATYTT
--ATTTGAATT--
 A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGTGTTGAATYTT----
--NNATNAATTGTTTNN
 A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGTGTTGAATYTT
---TTTGAAACCG
 A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGTGTTGAATYTT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGTGTTGAATYTT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGTGTTGAATYTT-
--CCTTTGATCTTT
 A G T C T A C G C A G T T A C G A C G T A C G T A C T G C G T A G T C A A C G T A G C T A G C T A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T