Information for 15-GCTGACCMACAGG (Motif 28)

A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G
Reverse Opposite:
A G T C A G T C A G C T A T C G A C G T A C T G A C T G A T C G A C G T G T A C C G T A A T C G G T A C
p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.827
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif30.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets40.0 +/- 22.5bp
Average Position of motif in Background52.5 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCTGACCMACAGG
--TGACCT-----
 A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTGACCMACAGG
TGCTGACTCA----
 A C G T A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTGACCMACAGG-
NNNNTGACCCGGCGCG
 A C G T A C G T A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTGACCMACAGG
--TGACCYCT---
 A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCTGACCMACAGG-----
---GAGCAACAGGTGGTT
 A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTGACCMACAGG-
--TGAGTGACAGSC
 A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGACCMACAGG
AATTTGCTGAC-------
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCTGACCMACAGG---
---ATGCAACAGGTGG
 A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTGACCMACAGG
--TGACCTTGAT-
 A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTGACCMACAGG
--TGACCTARTT-
 A C T G A T G C A C G T A C T G C G T A A T G C A G T C G T A C G T C A A T G C C T G A A C T G A C T G
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T