p-value: | 1e-9 |
log p-value: | -2.172e+01 |
Information Content per bp: | 1.770 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 2.43% |
Number of Background Sequences with motif | 92.5 |
Percentage of Background Sequences with motif | 0.19% |
Average Position of motif in Targets | 41.9 +/- 24.8bp |
Average Position of motif in Background | 51.9 +/- 27.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AATCAGACTD --BCAGACWA |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AATCAGACTD --CCAGACAG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AATCAGACTD-- --CCAGACRSVB |
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TBX1/MA0805.1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AATCAGACTD --TCACACCT |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AATCAGACTD---- CAAATCCAGACATCACA |
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MGA/MA0801.1/Jaspar
Match Rank: | 6 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AATCAGACTD --TCACACCT |
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TBX15/MA0803.1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AATCAGACTD --TCACACCT |
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Gfi1/MA0038.1/Jaspar
Match Rank: | 8 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AATCAGACTD CAAATCACTG-- |
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POL002.1_INR/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AATCAGACTD --TCAGTCTT |
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Dux/MA0611.1/Jaspar
Match Rank: | 10 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AATCAGACTD CCAATCAA---- |
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