Information for 7-GGTTACCCCC (Motif 9)

A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C
Reverse Opposite:
A C T G T C A G A C T G A C T G A C T G A G C T C T G A C T G A A G T C G T A C
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.848
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif47.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets47.6 +/- 27.1bp
Average Position of motif in Background47.4 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GGTTACCCCC----
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0201.1_Zfp281_2/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGTTACCCCC------
AGGAGACCCCCAATTTG
 A C G T A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGTTACCCCC------
AAATTCCCCCCGGAAGT
 A C G T A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGTTACCCCC
GGGGATTCCCCC
 A C G T A C G T A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGTTACCCCC
GCTGTTACCCT-
 A C G T A C G T A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GGTTACCCCC
TACCCTAGTTACCGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A A C G T

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGTTACCCCC--
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTTACCCCC----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTTACCCCC----
NNNNTGACCCGGCGCG
 A C G T A C G T A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0158.1_Rfx3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-10
Orientation:forward strand
Alignment:----------GGTTACCCCC---
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T A G C T T C G A A G T C A G T C A G T C A G T C T G A C A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G