Information for 3-RGCAGATGTC (Motif 2)

C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C
Reverse Opposite:
C T A G C G T A T G A C G T C A A C G T A T G C G C A T A C T G A T G C G A C T
p-value:1e-13
log p-value:-3.198e+01
Information Content per bp:1.550
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif349.3
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets41.8 +/- 25.5bp
Average Position of motif in Background51.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RGCAGATGTC-----
GGGCGATGACCAYTC
 C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RGCAGATGTC--
NGATGACGTCAT
 C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C A C G T A C G T
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RGCAGATGTC
AACAGATGGC
 C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:RGCAGATGTC
NGAAGC----
 C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-RGCAGATGTC-----
AAGCACCTGTCAATAT
 A C G T C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

HES5/MA0821.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-RGCAGATGTC-
TGGCACGTGCCG
 A C G T C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C A C G T
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---RGCAGATGTC----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

JUN/MA0488.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RGCAGATGTC--
AAGATGATGTCAT
 A C G T C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C A C G T A C G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

HES7/MA0822.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-RGCAGATGTC-
TGGCACGTGCCA
 A C G T C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--RGCAGATGTC-----
TNNNATGATTTCNNCNN
 A C G T A C G T C T G A A T C G T G A C C G T A T A C G T G C A C A G T A C T G G C A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T