Information for 3-GCTTCGTTTC (Motif 5)

A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C
Reverse Opposite:
T C A G G T C A T C G A C T G A T A G C A T C G T G C A T G C A T A C G A G T C
p-value:1e-11
log p-value:-2.694e+01
Information Content per bp:1.707
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.91%
Number of Background Sequences with motif583.7
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets45.4 +/- 27.8bp
Average Position of motif in Background48.7 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCTTCGTTTC--
CAGTTTCGNTTCTN
 A C G T A C G T A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCTTCGTTTC--
TNAGTTTCGATTTTN
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCTTCGTTTC-
ACTTTCGTTTCT
 A C G T A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTTCGTTTC
GCTCCG----
 A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCTTCGTTTC--
NTGGTTTCGGTTNNN
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCTTCGTTTC---
---TGGTTTCAGT
 A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTTCGTTTC
GCTTCC----
 A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTTCGTTTC-
TNTGGTTTCGATACN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCGTTTC------
NNNTTGGTTTCGNTNNN
 A C G T A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTTCGTTTC--
GTTTCACTTCCG
 A C T G A G T C A C G T A C G T A T G C A T C G A G C T A G C T A C G T A G T C A C G T A C G T
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G