Information for 2-TGTGCCTTTT (Motif 4)

A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T
Reverse Opposite:
C T G A T C G A T C G A C G T A C A T G T A C G G T A C T C G A T A G C G T C A
p-value:1e-12
log p-value:-2.795e+01
Information Content per bp:1.651
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif12.27%
Number of Background Sequences with motif2611.4
Percentage of Background Sequences with motif5.54%
Average Position of motif in Targets54.2 +/- 27.8bp
Average Position of motif in Background50.4 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCCTTTT
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCCTTTT
CTGTTCCTGG-
 A C G T A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCCTTTT
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTGCCTTTT
-TTGACTTTT
 A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTGCCTTTT
GTCTGTGGTTT--
 A C G T A C G T A C G T A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTGCCTTTT
NNTGTGGTTT--
 A C G T A C G T A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGTGCCTTTT-
TGTGGATTNNN
 A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTGCCTTTT----
--TGACCTTTNCNT
 A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTGCCTTTT----
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCCTTTT
NNHTGTGGTTWN-
 A C G T A C G T A C G T A C G T A T C G A G C T C A T G A T G C G T A C G C A T A G C T A G C T G A C T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T