Information for 12-CCTCCTTTGTCGC (Motif 14)

A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.644e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 36.4bp
Average Position of motif in Background51.6 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CCTCCTTTGTCGC
---CCTTTGTT--
 A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CCTCCTTTGTCGC
---CCWTTGTY--
 A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCTCCTTTGTCGC---
ANTCCTTTGTCTNNNN
 A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CCTCCTTTGTCGC
---CCTTTGTTTT
 A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CCTCCTTTGTCGC
---YCTTTGTTCC
 A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CCTCCTTTGTCGC
---CCWTTGTYYB
 A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCTCCTTTGTCGC
----CTTTGT---
 A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCTCCTTTGTCGC
---CCATTGTTNY
 A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTCCTTTGTCGC
AGGVNCCTTTGT---
 A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCTCCTTTGTCGC
---CCATTGTTTT
 A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T