Information for 9-GAAAAACCTTAGA (Motif 8)

A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T C G T A C G T A A C T G A C T G A C G T C G A T A C G T A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 28.7bp
Average Position of motif in Background33.5 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAAAAACCTTAGA-
----AACCTTATAT
 A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAAAAACCTTAGA
---CAAGCTT---
 A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GAAAAACCTTAGA---
------CCTTTGAWGT
 A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GAAAAACCTTAGA---
------CCTTTGATGT
 A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAAAAACCTTAGA-
GCAAAACATTACTA
 A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GAAAAACCTTAGA-----
---TATCATTAGAACGCT
 A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GAAAAACCTTAGA
--AAACMATTAN-
 A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A
A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAACCTTAGA
TGGAAAA--------
 A C G T A C G T A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAAAAACCTTAGA------
--AATCCCTTTGATCTATC
 A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAACCTTAGA--
NNNNCAACCTTCGNGA
 A C G T A C T G C G T A G T C A G T C A C G T A C G T A G T A C A G T C A C G T A C G T C T G A A C T G C G T A A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A