Information for 4-AATTTCAAAA (Motif 5)

G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A
Reverse Opposite:
G A C T C A G T C A G T A G C T C T A G T C G A C T G A T G C A G A C T C A G T
p-value:1e-12
log p-value:-2.885e+01
Information Content per bp:1.687
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif7.97%
Number of Background Sequences with motif1429.4
Percentage of Background Sequences with motif2.98%
Average Position of motif in Targets50.6 +/- 26.6bp
Average Position of motif in Background50.5 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AATTTCAAAA
CGGTTTCAAA-
 A C G T G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AATTTCAAAA--
-ATTGCACAATA
 G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A A C G T A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AATTTCAAAA----
CAATTGCAAAAATAT
 A C G T G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A A C G T A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AATTTCAAAA
-ATTGCATAA
 G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A
A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AATTTCAAAA
-NATTCAAAT
 G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AATTTCAAAA-
-VTTRCATAAY
 G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A A C G T
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AATTTCAAAA-
-ACATCAAAGG
 G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AATTTCAAAA--
--TTGCAACATN
 G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AATTTCAAAA-
-ATTGCGCAAC
 G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A A C G T
A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AATTTCAAAA
GCATTCCAGN-
 A C G T G T C A C T G A A C G T A G C T A G C T G A T C C T G A G T C A G T C A C T G A
C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T