p-value: | 1e-8 |
log p-value: | -2.027e+01 |
Information Content per bp: | 1.669 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.07% |
Number of Background Sequences with motif | 26.1 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 60.9 +/- 23.8bp |
Average Position of motif in Background | 50.9 +/- 26.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
LIN54/MA0619.1/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTTGCTTTTTAAAAGM -----NATTCAAAT-- |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTTGCTTTTTAAAAGM ---CGGTTTCAAA--- |
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TATA-Box(TBP)/Promoter/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTTGCTTTTTAAAAGM ----CCTTTTATAGNC |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTTGCTTTTTAAAAGM -----NTTTTACGAGN |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GTTGCTTTTTAAAAGM ------TTTTATTRGN |
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PB0182.1_Srf_2/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTTGCTTTTTAAAAGM NNNNTTTTTTTTTNAAC- |
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PB0187.1_Tcf7_2/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTTGCTTTTTAAAAGM- --NNNTTTNTAATACNG |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTTGCTTTTTAAAAGM--- ---NAATTTTACGAGNTNN |
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PH0048.1_Hoxa13/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTTGCTTTTTAAAAGM--- ---ANATTTTACGAGNNNN |
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Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTTGCTTTTTAAAAGM -TTAATGTTTAACC-- |
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