p-value: | 1e-6 |
log p-value: | -1.577e+01 |
Information Content per bp: | 1.491 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 0.96% |
Number of Background Sequences with motif | 32.5 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 69.9 +/- 18.5bp |
Average Position of motif in Background | 49.2 +/- 24.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0062.1_Hoxb7/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---KTAATTACWG--- GTAGTAATTAATGCAA |
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NKX6-1/MA0674.1/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | KTAATTACWG TTAATTAN-- |
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MEOX2/MA0706.1/Jaspar
Match Rank: | 3 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -KTAATTACWG NTTAATTACN- |
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MEOX1/MA0661.1/Jaspar
Match Rank: | 4 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -KTAATTACWG GNTAATTAGN- |
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PH0071.1_Hoxc6/Jaspar
Match Rank: | 5 |
Score: | 0.72 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----KTAATTACWG--- CAAATTAATTAATAAAA |
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PH0072.1_Hoxc8/Jaspar
Match Rank: | 6 |
Score: | 0.72 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----KTAATTACWG- TTGGGGTAATTAACGT |
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PH0055.1_Hoxa7_2/Jaspar
Match Rank: | 7 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---KTAATTACWG--- GTAGTAATTAATGGAA |
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Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer
Match Rank: | 8 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | KTAATTACWG YTAATTAVHT |
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PH0175.1_Vax2/Jaspar
Match Rank: | 9 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---KTAATTACWG--- GNCTTAATTAGTGNNN |
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PH0054.1_Hoxa7_1/Jaspar
Match Rank: | 10 |
Score: | 0.70 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----KTAATTACWG--- CGAGTTAATTAATAAGC |
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