Information for 6-GCGGGTGCCCCTC (Motif 5)

A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C
Reverse Opposite:
A C T G G T C A A T C G A T C G A T C G A C T G G T A C G C T A A T G C A G T C A G T C A C T G A G T C
p-value:1e-12
log p-value:-2.910e+01
Information Content per bp:1.857
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 28.9bp
Average Position of motif in Background52.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCGGGTGCCCCTC
SDGCAGGTGCNS---
 A C G T A C G T A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCGGGTGCCCCTC-
TTGGGGGCGCCCCTAG
 A C G T A C G T A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCGGGTGCCCCTC---
GGGTGTGCCCAAAAGG
 A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCGGGTGCCCCTC
----ATGCCCACC
 A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCGGGTGCCCCTC
GCGCCTGCGCA--
 A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCGGGTGCCCCTC
CGCAGCTGCG----
 A C G T A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGTGCCCCTC
GACAGGTGTN----
 A C G T A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGTGCCCCTC
NNCAGGTGNN----
 A C G T A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGTGCCCCTC
NNCAGGTGCG----
 A C G T A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCGGGTGCCCCTC
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C T G G T A C C T A G A C T G A T C G C G A T A C T G A G T C A T G C A T G C A T G C A C G T A G T C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G