Information for 6-AGTCATTGGGCAG (Motif 9)

C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G
Reverse Opposite:
A G T C C G A T A T C G A T G C A G T C G T A C G T C A T C G A C A G T A T C G T C G A T A G C G A C T
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.538
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 19.2bp
Average Position of motif in Background53.0 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGTCATTGGGCAG
NTGCCCTTGGGCGN
 A C G T C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTCATTGGGCAG----
-NNNNTTGGGCACNNCN
 C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTCATTGGGCAG-
--TGATTGGCTANN
 C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTCATTGGGCAG
TCACCTCTGGGCAG
 A C G T C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGTCATTGGGCAG
----NGTGGGCAT
 C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGTCATTGGGCAG
--WDNCTGGGCA-
 C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGTCATTGGGCAG
----TNNGGGCAG
 C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGTCATTGGGCAG
---CAAAGGTCAG
 C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTCATTGGGCAG
-CCGATTGGCT--
 C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGTCATTGGGCAG
GAGGTCAAAGGTCA-
 A C G T A C G T C T G A A T C G A G C T T A G C G T C A A G C T C A G T A C T G T C A G T A C G T A G C G C T A C T A G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T