Information for 2-CCATRGGAGGCGCTAT (Motif 2)

G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T
Reverse Opposite:
C G T A A G C T C T G A A T C G A G T C A C T G A G T C G T A C G A C T A G T C G T A C A G T C G T C A G C A T A T C G A C T G
p-value:1e-21
log p-value:-4.915e+01
Information Content per bp:1.731
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.7 +/- 17.8bp
Average Position of motif in Background48.7 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCATRGGAGGCGCTAT--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCATRGGAGGCGCTAT
--GGGGGCGGGGC---
 G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T
A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CCATRGGAGGCGCTAT
--------GGCGCGCT
 G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCATRGGAGGCGCTAT
-AGGGGGCGGGGCTG-
 G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCATRGGAGGCGCTAT
---GGGGNGGGGC---
 G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T
A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCATRGGAGGCGCTAT---
---TTGGGGGCGCCCCTAG
 G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCATRGGAGGCGCTAT
--GGGGGCGGGGCC--
 G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCATRGGAGGCGCTAT
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCATRGGAGGCGCTAT
NNVDGGGYGGGGCYN-
 G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCATRGGAGGCGCTAT-
NNNAAGGGGGCGGGNNN
 G T A C A T G C C G T A A C G T C T A G A C T G C T A G C T G A A C T G A C T G T G A C A C T G A T G C A G C T T C G A A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C