Information for 13-GTGCACCTTTGCT (Motif 10)

A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A G T C A C G T A A C T G C T A G A C G T A T C G A G T C C G T A G T A C
p-value:1e-9
log p-value:-2.174e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.3 +/- 30.2bp
Average Position of motif in Background51.3 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGCACCTTTGCT-----
-TNNTCCTTTGTTCTNNT
 A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTGCACCTTTGCT-----
-NNNTCCTTTGTTCTNNN
 A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGCACCTTTGCT-----
-AATCCCTTTGATCTATC
 A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGCACCTTTGCT-----
-ATTTCCTTTGATCTATA
 A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GTGCACCTTTGCT--
-----YCTTTGTTCC
 A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GTGCACCTTTGCT
-----CCTTTGTT
 A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GTGCACCTTTGCT--
-----CCTTTGTTTT
 A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GTGCACCTTTGCT----
-----CCTTTGATCTTT
 A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGCACCTTTGCT-----
-NNTTCCTTTGATCTANA
 A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GTGCACCTTTGCT--
-----CCTTTGATGT
 A C T G A C G T C T A G A T G C G T C A A G T C A G T C C G A T A C G T A C G T C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T