Information for 5-CWCGGCCSGGCYG (Motif 7)

A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G
Reverse Opposite:
A G T C C T G A A C T G A G T C A G T C A T G C A C T G A C T G A G T C A G T C A T C G C G T A A C T G
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.864
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.6 +/- 28.2bp
Average Position of motif in Background53.9 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CWCGGCCSGGCYG
DCTCAGCAGG----
 A C G T A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CWCGGCCSGGCYG
CACAGCAGGGGG-
 A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CWCGGCCSGGCYG-
DCHCAGCAGGRGGCC
 A C G T A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CWCGGCCSGGCYG-----
---GGNGCGNCTGTTNNN
 A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CWCGGCCSGGCYG
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CWCGGCCSGGCYG
ACATGCCCGGGCAT
 A C G T A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CWCGGCCSGGCYG
GAGCACAGCAGGACA-
 A C G T A C G T A C G T A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CWCGGCCSGGCYG
NNGCNCTGCGCGGC--
 A C G T A C G T A C G T A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CWCGGCCSGGCYG
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CWCGGCCSGGCYG
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C C G A T A T G C C T A G A C T G A G T C G T A C A T C G A C T G A C T G A G T C A G C T A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T