Information for 4-HGTCTGAGAAAAT (Motif 6)

G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T
Reverse Opposite:
C G T A A G C T G A C T A C G T A C G T G T A C A C G T G A T C C G T A A C T G C G T A A G T C C G T A
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.4 +/- 26.7bp
Average Position of motif in Background55.3 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-HGTCTGAGAAAAT
NTTTCTNAGAAA--
 A C G T G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-HGTCTGAGAAAAT
TWGTCTGV------
 A C G T G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:HGTCTGAGAAAAT
--NCYAATAAAA-
 G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T
A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:HGTCTGAGAAAAT
---CCAATAAAAA
 G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:HGTCTGAGAAAAT
--CCYMATAAAA-
 G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:HGTCTGAGAAAAT---
AACCCAATAAAATTCG
 G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-HGTCTGAGAAAAT---
TAAACTGATAAGAAGAT
 A C G T G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:HGTCTGAGAAAAT---
CTACCAATAAAATTCT
 G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:HGTCTGAGAAAAT----
AATGCAATAAAATTTAT
 G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-HGTCTGAGAAAAT
CTGTCTGG------
 A C G T G A C T A C T G A C G T A G T C A C G T C T A G C G T A A C T G C G T A C G T A C T G A C T G A C G A T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T