Information for 4-CTTCTYYCMWCTYAMT (Motif 7)

A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T
Reverse Opposite:
C G T A A C G T A C G T C T A G C G T A A C T G C G A T A C T G A C T G C T G A C T A G C G T A A C T G C G T A C T G A A C T G
p-value:1e-10
log p-value:-2.411e+01
Information Content per bp:1.839
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 24.4bp
Average Position of motif in Background53.3 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTYYCMWCTYAMT---
GCCTCCTCCMTCWGACTGKS
 A C G T A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTCTYYCMWCTYAMT
CCGTCTTCCCCCTCAC-
 A C G T A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTCTYYCMWCTYAMT
GCTTCC-----------
 A C G T A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CTTCTYYCMWCTYAMT
------ACCACTTAA-
 A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CTTCTYYCMWCTYAMT
------ACCACTTAA-
 A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CTTCTYYCMWCTYAMT
------NSCACTYVAV
 A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CTTCTYYCMWCTYAMT
-----AASCACTCAA-
 A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CTTCTYYCMWCTYAMT---
--CTTAACCACTTAAGGAT
 A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTYYCMWCTYAMT
WCATTTTGKCCTCYT---
 A C G T A C G T A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CTTCTYYCMWCTYAMT
TCTTATCTCCC------
 A C G T A G T C A G C T A C G T A G T C C G A T A G T C A G C T G T A C G T A C C G T A A G T C A C G T A G T C G T C A G T C A A C G T
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T