Information for 13-CVCCCTCCCAGCTCCC (Motif 34)

A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
Reverse Opposite:
A C T G C T A G A C T G C G T A A C T G A G T C G C A T A C T G A C T G C T A G C G T A A C T G A C T G C T A G A C G T C T A G
p-value:1e-6
log p-value:-1.598e+01
Information Content per bp:1.815
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets32.5 +/- 23.9bp
Average Position of motif in Background50.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CVCCCTCCCAGCTCCC
ANNTNCCCACCCANNAC--
 A C G T A C G T A C G T A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.59
Offset:10
Orientation:forward strand
Alignment:CVCCCTCCCAGCTCCC
----------GCTCCG
 A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CVCCCTCCCAGCTCCC
--CACTTCCTGT----
 A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CVCCCTCCCAGCTCCC
--CACTTCCTGT----
 A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CVCCCTCCCAGCTCCC
TCCTCCTCCCCCTCCTCCTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
G A C T G A T C G A T C G A C T G A T C G A T C G A C T A G T C G A T C G A T C G A T C A G T C A G C T A G T C G T A C C G A T A T G C G T A C G A C T A G T C G A T C A C G T

ELK4/MA0076.2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CVCCCTCCCAGCTCCC
-CCACTTCCGGC----
 A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CVCCCTCCCAGCTCCC
---ACTTCCGGTN---
 A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
A C G T A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CVCCCTCCCAGCTCCC
------CNGTCCTCCC
 A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CVCCCTCCCAGCTCCC
---ACTTCCGGTT---
 A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
A C G T A C G T A C G T T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CVCCCTCCCAGCTCCC
---ACTTCCTGBT---
 A G T C T C G A A G T C G T A C A G T C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A G T C A G T C G T A C
A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T A C G T A C G T A C G T